hpc-class: Using OpenMP or -parallel
Parallelism beyond a single node (2 CPUs on hpc-class)
requires the use of MPI, however MPI requires major changes
to an existing program. Two ways exist to get parallelism
with a single 2 CPU node can either be obtained with automatic
parallelism (the -parallel compiler option) or with OpenMP
(the -openmp compiler option).
The simplest way to get parallel execution is to add -parallel
to your compile command. Then issue
setenv OMP_NUM_THREADS 2
./a.out
Another simple way to obtain parallelism is by using OpenMP,
which can be used to express parallelism on a shared memory machine.
Since each of the nodes on hpc-class is a shared memory
machine with 2 processors, OpenMP can be used to obtain
parallelism for two processors.
It requires changes to the program but not nearly so much as
MPI. (The gains are generally less than for MPI, but greater
than that for automatic parallelism.)
E.g.
Having the OpenMP directive
!OMP$ PARALLEL DO
just before
do j=2,n-1
do i=2,m-1
a(i,j)=(b(i,j+1)+b(i,j-1)+b(i-1,j)+b(i+1,j)+4.d0*b(i,j))/6.d0
enddo
enddo
signals to an OpenMP compiler that the j loop can be performed on multiple
processors.
When run, issue
setenv OMP_NUM_THREADS 2
./a.out
and the program will be run with two "threads" which can run on each of
the two processors. Everything runs on just one thread until the
above directive is reached, when the second thread performs half
the work in the j loop.
Without the -openmp flag on the compilation step the directive is
ignored as a comment.
For C and C++, pragmas are used rather than directives.
In general, OpenMP programs run the fastest when most of the operations
are on data which is "private" rather than "shared". See the standard
for the meaning of private and shared data with regard to OpenMP.
The Intel compilers on hpc-class implement OpenMP 2.0 except for the
workshare directive.